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ENH: added 'hsvs' option to 5ttgen + mrtransform fix #3630

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3afcd62
Update utils.py
teanijarvFeb 20, 2024
367776d
Update .zenodo.json
teanijarvFeb 20, 2024
c08e17b
Update utils.py
teanijarvFeb 20, 2024
eda6497
Fix generate5tt input
teanijarvFeb 28, 2024
7fc44fd
Remove the -inverse parameter position change
teanijarvFeb 28, 2024
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Original file line numberDiff line numberDiff line change
Expand Up@@ -11,6 +11,7 @@
traits,
TraitedSpec,
File,
Directory,
InputMultiPath,
isdefined,
)
Expand DownExpand Up@@ -224,13 +225,16 @@ class Generate5ttInputSpec(MRTrix3BaseInputSpec):
"fsl",
"gif",
"freesurfer",
"hsvs",
argstr="%s",
position=-3,
mandatory=True,
desc="tissue segmentation algorithm",
)
in_file = File(
exists=True, argstr="%s", mandatory=True, position=-2, desc="input image"
in_file = traits.Either(
File(exists=True),
Directory(exists=True),
argstr="%s", mandatory=True, position=-2, desc="input image / directory"
)
out_file = File(argstr="%s", mandatory=True, position=-1, desc="output image")

Expand Down