Gemelli is a tool box for running Robust Aitchison PCA (RPCA), Joint Robust Aitchison PCA (Joint-RPCA), TEMPoral TEnsor Decomposition (TEMPTED), and Compositional Tensor Factorization (CTF) on sparse compositional omics datasets.
Compositional data analysis in Julia
multilevelcoda R package for Bayesian multilevel compositional data analysis
Python package for compositional data analysis including CLR/ILR, proportionality, partial correlation with basis shrinkage, and visualizations.
Simplex space operations for compositional data implemented in Python.
Functions to analyse compositional data and produce confidence intervals for relative increases and decreases in the compositional components
Functions to analyse compositional data and produce confidence intervals for relative increases and decreases in the compositional components
A repository for sharing R codes between those working with Goldilocks Work interventions.
Functional Concurrent Regression with Compositional Covariates
Este repositorio contiene la colección de Jupyter Notebooks generados para implementar la metodología descrita en el documento de Tesis "Detección de genomas anómalos de sars-cov-2 por medio de algoritmos de aprendizaje no supervisados".
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