Merged

[ENH]: Add functions to mrtrix3 interface #3613

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984b7e8
added node maskfilter
Oct 17, 2023
a1ea55a
fixed comma
Oct 17, 2023
fa70f4a
fixed _list_outputs
Oct 17, 2023
a5afb28
added url to mrtrix3 docu
Oct 17, 2023
a9161e2
added mtnormalise
Oct 23, 2023
4f04c14
added mtnormalise
Oct 23, 2023
25e8ec6
fixing mtnormalise
Oct 23, 2023
bb3d352
fixed: renaming
Oct 23, 2023
820d1c3
fixed output of mtnormalise
Oct 24, 2023
c16cb34
fixing mtnormalise
Oct 24, 2023
20c0995
added 5ttgmwmi
Oct 24, 2023
a26c6b1
fixed comma
Oct 24, 2023
bc595b8
adding my name
Oct 24, 2023
bff1028
Merge branch 'master' into added_mrtrix3_functions
effigiesMar 17, 2024
27d285a
Update nipype/interfaces/mrtrix3/utils.py
effigiesMar 17, 2024
9720b95
MNT: Run codespell and black
effigiesMar 20, 2024
903dee5
TEST: make specs
effigiesMar 20, 2024
8c9c041
DOCTEST: Resolve typos
effigiesMar 20, 2024
5599348
TEST: Fix doctests, add example file stubs
effigiesMar 20, 2024
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fixed: renaming
  • Loading branch information
Lionel Butry committedOct 23, 2023
commit bb3d352233b2c13815961361050d7146e31d7ee1
Original file line numberDiff line numberDiff line change
Expand Up@@ -1248,7 +1248,7 @@ def _list_outputs(self):
return outputs

class MTNormaliseInputSpec(MRTrix3BaseInputSpec):
fod_wm = File(
wm_fod = File(
argstr="%s",
exists=True,
mandatory=False,
Expand All@@ -1261,7 +1261,7 @@ class MTNormaliseInputSpec(MRTrix3BaseInputSpec):
position=2,
desc="output file of white matter tissue compartment"
)
fod_gm = File(
gm_fod = File(
argstr="%s",
exists=True,
mandatory=False,
Expand All@@ -1274,7 +1274,7 @@ class MTNormaliseInputSpec(MRTrix3BaseInputSpec):
position=4,
desc="output file of grey matter tissue compartment"
)
fod_csf = File(
csf_fod = File(
argstr="%s",
exists=True,
mandatory=False,
Expand Down